Information for 3-NSSGCCGCCATCTTGR (Motif 3)

C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
Reverse Opposite:
A G T C T A G C C T G A G T C A T A C G C G T A A C G T A T C G A C T G A G T C A T C G T A C G T G A C A T C G T A C G A G T C
p-value:1e-48
log p-value:-1.111e+02
Information Content per bp:1.647
Number of Target Sequences with motif77.0
Percentage of Target Sequences with motif8.31%
Number of Background Sequences with motif377.9
Percentage of Background Sequences with motif0.86%
Average Position of motif in Targets50.5 +/- 24.7bp
Average Position of motif in Background52.8 +/- 38.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.96
Offset:3
Orientation:reverse strand
Alignment:NSSGCCGCCATCTTGR
---GCCGCCATCTTG-
 C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
A C G T A C G T A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.95
Offset:3
Orientation:reverse strand
Alignment:NSSGCCGCCATCTTGR
---GCNGCCATCTTG-
 C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
A C G T A C G T A C G T C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.75
Offset:2
Orientation:forward strand
Alignment:NSSGCCGCCATCTTGR
--GTCCGCCATTA---
 C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
A C G T A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T

E2F2/MA0864.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--NSSGCCGCCATCTTGR
AAAATGGCGCCATTTT--
 A C G T A C G T C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
C G T A C G T A C G T A C G T A C G A T A T C G A C T G A G T C A C T G A G T C T A G C G C T A G C A T C G A T C G A T C G A T A C G T A C G T

E2F3/MA0469.2/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---NSSGCCGCCATCTTGR
AAAAATGGCGCCATTTTT-
 A C G T A C G T A C G T C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
T C G A T C G A C G T A G C T A C G T A C A G T A T C G A C T G A T G C A C T G A T G C T A G C G T C A G C A T C G A T G C A T A G C T G A C T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--NSSGCCGCCATCTTGR
TACGCCCCGCCACTCTG-
 A C G T A C G T C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:6
Orientation:forward strand
Alignment:NSSGCCGCCATCTTGR
------GCCATCTGTT
 C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:NSSGCCGCCATCTTGR---
--CCNNACCATCTGGCCTN
 C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G A C G T A C G T A C G T
A C G T A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-NSSGCCGCCATCTTGR---
CNNBRGCGCCCCCTGSTGGC
 A C G T C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--NSSGCCGCCATCTTGR
CCTTCGGCGCCAAAAGG-
 A C G T A C G T C T A G A T G C A T G C A C T G A T G C T A G C C T A G A G T C A T G C G T C A A C G T A T G C A C G T A G C T A C T G T C A G
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T