Information for 18-GCAGCGGGTTGGT (Motif 20)

A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
Reverse Opposite:
C G T A A T G C A G T C C G T A C G T A A G T C A G T C G T A C A T C G A T G C C G A T A T C G A G T C
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 18.5bp
Average Position of motif in Background36.2 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGCGGGTTGGT--
GGGGGGGGGGGGGGA
 A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T A C G T A C G T
A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GCAGCGGGTTGGT------
---TCGCGAAGGTTGTACT
 A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCAGCGGGTTGGT
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGGGTTGGT
DCTCAGCAGG-----
 A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGGGTTGGT
NCGCAGCGGGGGGTC
 A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

PB0149.1_Myb_2/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCGGGTTGGT--
NNNTGGCAGTTGGTNN
 A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

GLIS2/MA0736.1/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GCAGCGGGTTGGT
CTTCGCGGGGGGTC---
 A C G T A C G T A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCGGGTTGGT
DCHCAGCAGGRGGCC
 A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GCAGCGGGTTGGT
NNNANTGCAGTGCNNTT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GCAGCGGGTTGGT---
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C T G A T G C C G T A A T C G A T G C A C T G T A C G A C T G C G A T C G A T A C T G A T C G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A