Information for 6-GAAAASGGCARGGTTT (Motif 9)

T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
Reverse Opposite:
C T G A T C G A C T G A G T A C A G T C A G T C A C G T A T C G A G T C A G T C A T C G A C G T A C G T A C G T A C G T A T G C
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif26.6
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets35.3 +/- 25.8bp
Average Position of motif in Background42.7 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIC/MA0687.1/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
AAAAAGAGGAAGTA--
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
G T C A C T G A G T C A G T C A C G T A T A C G T G C A A T C G C A T G G C T A T G C A C T A G G C A T G T C A A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
AAAAAGCGGAAGTA--
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAAASGGCARGGTTT
AACAAAGG--------
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
-GAAASYGAAASY---
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
--CAAGGHCANV----
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GAAAASGGCARGGTTT
-GAAAGTGAAAGT---
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
AGAAAGTGAAAGTGA-
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAAAASGGCARGGTTT
RACAAWGG--------
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
-AAAGRGGAAGTG---
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
A C G T C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GAAAASGGCARGGTTT
----AAGGCAAGTGT-
 T A C G G T C A T G C A C G T A C G T A A T G C A C T G A C T G T A G C C G T A C T A G A C T G C A T G A G C T A G C T A G C T
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T