Information for 2-ATGCGTTAGGAMC (Motif 5)

C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
Reverse Opposite:
A C T G A C T G C G A T G T A C T G A C C G A T C T G A G T C A T G A C T C A G A G T C C G T A A C G T
p-value:1e-11
log p-value:-2.691e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets76.6 +/- 11.9bp
Average Position of motif in Background44.6 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFE2/MA0841.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ATGCGTTAGGAMC
GATGAGTCATN---
 A C G T C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
T A C G T C G A A C G T C T A G T C G A A T C G C A G T G T A C C T G A A G C T A C T G A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC---
NNGTTTTACGACTTTA
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC---
ANNTTTTACGACNTNN
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

HOXC12/MA0906.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC
--NTTTTACGACC
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
A C G T A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC
ATGAGTCAT----
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC---
NNNTTTTACGACNTTN
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

HOXC11/MA0651.1/Jaspar

Match Rank:7
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC
--NTTTTACGACC
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
A C G T A C G T C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C

HOXD12/MA0873.1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:ATGCGTTAGGAMC
--NTTTTACGACT
 C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
A C G T A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T

BATF::JUN/MA0462.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---ATGCGTTAGGAMC
GAAATGACTCA-----
 A C G T A C G T A C G T C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C
C T A G C T G A C G T A G T C A A C G T A C T G C G T A T A G C A C G T T G A C C G T A A C G T A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATGCGTTAGGAMC---
GNNNTTTTACGACCTNA
 A C G T C G T A A C G T C T A G A G T C A C T G A C G T A G C T C G T A A C T G A C T G C G T A G T A C A G T C A C G T A C G T A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A