Information for 10-TTAGGCTTAA (Motif 37)

A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C T G A G T C A G T C A C G T C G T A C G T A
p-value:1e-5
log p-value:-1.241e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.7 +/- 18.4bp
Average Position of motif in Background13.1 +/- 3.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TTAGGCTTAA
--NGGATTAA
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

Pitx1/MA0682.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTAGGCTTAA
--GGGATTAA
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PITX3/MA0714.1/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TTAGGCTTAA-
--GGGATTANN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTAGGCTTAA
-NGGGATTA-
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTAGGCTTAA-
---GGATTAGC
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTAGGCTTAA-
-VRGGATTARN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

RHOXF1/MA0719.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAGGCTTAA
--NGGATTAN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTAGGCTTAA
--CGGATTAN
 A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

Dmbx1/MA0883.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTAGGCTTAA----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTAGGCTTAA----
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A