Information for 17-GGGTTGACTTTTG (Motif 36)

A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A G T C A C G T A C G T A A C T G A C G T A G T C C G T A C G T A A G T C G T A C A T G C
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 3.3bp
Average Position of motif in Background48.7 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:GGGTTGACTTTTG
---TTGACTTTT-
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G
A C G T A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGGTTGACTTTTG------
--GTTGACCTTTGACCTTT
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGTTGACTTTTG---
NNNGTGACCTTTGNNN
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGGTTGACTTTTG---
NNNNTGACCTTTNNNN
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGTTGACTTTTG--
NNATTGGACTTTNGNN
 A C G T A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:6
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GGGTTGACTTTTG---
----TGACCTTTNCNT
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGGTTGACTTTTG
---CTGACCTTTG
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GGGTTGACTTTTG-----
----TGACCTTTGACCTN
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GGGTTGACTTTTG-----
----TGACCTTTGACCCC
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGGTTGACTTTTG
-TGTTTACTTT--
 A T C G A C T G A C T G A C G T A C G T C T A G C G T A A G T C A C G T A C G T A C G T A C G T A C T G
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T