Information for 1-GGACTTTCAC (Motif 3)

C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C
Reverse Opposite:
T C A G A G C T A C T G C G T A C G T A C T G A A C T G A C G T A G T C A G T C
p-value:1e-12
log p-value:-2.841e+01
Information Content per bp:1.856
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif71.3
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets39.6 +/- 24.0bp
Average Position of motif in Background44.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.77
Offset:2
Orientation:forward strand
Alignment:GGACTTTCAC----
--ACTTTCACTTTC
 C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0134.1_Hnf4a_2/Jaspar

Match Rank:2
Score:0.76
Offset:-5
Orientation:reverse strand
Alignment:-----GGACTTTCAC-
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---GGACTTTCAC---
ATTGGACTTTGACCCC
 A C G T A C G T A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCAC
GGGAATTTCC-
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGACTTTCAC-----
TCACTTTCACTTTCN
 C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

REL/MA0101.1/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCAC
GGGGATTTCC-
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGACTTTCAC
GGGAATTTCC-
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGACTTTCAC
GGGGATTTCC-
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGACTTTCAC----
TGGACTTTGNNCTCN
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGACTTTCAC-----
TGGACTTTGNNCTNTG
 A C G T C T A G A C T G G T C A A G T C A G C T A C G T C G A T A G T C T C G A A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G