Information for 5-TGTGCATATDCTG (Motif 14)

A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G G C A T T C G A A C G T C G T A C A G T A T C G A G T C C G T A A T G C G T C A
p-value:1e-9
log p-value:-2.294e+01
Information Content per bp:1.720
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets56.3 +/- 19.4bp
Average Position of motif in Background47.7 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGTGCATATDCTG
-ATGMATATDC--
 A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--TGTGCATATDCTG
AATTTGCATANT---
 A C G T A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATATDCTG
ATTTGCATA-----
 A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATATDCTG
ATTTGCATAT----
 A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T A C G T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATATDCTG
ATTTGCATA-----
 A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGTGCATATDCTG
ATTTGCATAA----
 A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCATATDCTG-
ATTTGCATACAATGG
 A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G A C G T
G T C A A G C T G A C T C G A T T C A G T G A C C G T A G A C T C G T A A T G C C G T A C G T A C G A T C T A G T C A G

PB0026.1_Gm397_1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----TGTGCATATDCTG
CAGATGTGCACATACGT
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T

POU2F2/MA0507.1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGTGCATATDCTG
TTCATTTGCATAT----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:10
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGCATATDCTG
TNTAATTTGCATANNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T T A C G A T G C G T C A A C G T G T C A A C G T C G T A A G T C A G C T A C T G
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A A C G T A C G T