Information for 7-CTGAGTGCCTTAGTGA (Motif 13)

A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
Reverse Opposite:
A G C T G A T C G T C A T A G C G C A T T G C A C T G A C T A G T C A G T A G C G C T A T A G C G C A T A T G C C T G A T C A G
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.549
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.76%
Number of Background Sequences with motif1124.5
Percentage of Background Sequences with motif2.32%
Average Position of motif in Targets49.7 +/- 23.7bp
Average Position of motif in Background50.8 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGTGCCTTAGTGA
CTTGAGTGGCT------
 A C G T A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGCCTTAGTGA
TTAAGTGCTT------
 A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CTGAGTGCCTTAGTGA
TTRAGTGSYK------
 A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGCCTTAGTGA
TTGAGTGSTT------
 A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGCCTTAGTGA
TTAAGTGC--------
 A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGAGTGCCTTAGTGA
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGTGCCTTAGTGA
CTYRAGTGSY-------
 A C G T A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTGAGTGCCTTAGTGA
RGTTAGTGCCCY-----
 A C G T A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTGAGTGCCTTAGTGA
BTBRAGTGSN-------
 A C G T A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGAGTGCCTTAGTGA
TTAAGTGGN-------
 A G T C G A C T T A C G C G T A A T C G C G A T A T C G A G T C A G T C G A C T A C G T C G T A A C T G C A G T C T A G T C G A
G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T