Information for 2-WRWGATRKCARTGGGT (Motif 5)

C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C G T A C A G T C C G T A A G C T A C G T A C T G T G A C G A T C C G T A A C G T A G T C C G A T A G T C C G A T
p-value:1e-13
log p-value:-3.219e+01
Information Content per bp:1.835
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.7 +/- 26.1bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0126.1_Gata5_2/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---WRWGATRKCARTGGGT
GACAGAGATATCAGTGT--
 A C G T A C G T A C G T C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:WRWGATRKCARTGGGT------
--NGAGGTCANNGAGTTCANNN
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:WRWGATRKCARTGGGT--
--GTAGGTCACTGGGTCA
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT--
--NNNTGGCAGTTGGTNN
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

PB0132.1_Hbp1_2/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT---
--NNTNNACAATGGGANNN
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT--
---CACGGCAGTTGGTNN
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT-
-NNNNTGCCAGTGATTG
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T
A C G T G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Nr2f6(var.2)/MA0728.1/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:WRWGATRKCARTGGGT--
---GAGGTCAAAAGGTCA
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C T G A A C T G C T A G A C G T A G T C G T C A C G T A C T G A C G T A A C T G A C T G C G A T A G T C C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT
----VRAACAATGG--
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:WRWGATRKCARTGGGT
------AACAAAGG--
 C G T A C T A G C G T A A C T G C G T A A C G T C T A G A C T G A G T C C G T A C T G A C G A T A C T G A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T