Information for 3-CCTGTCYCAAGGC (Motif 4)

A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G A T A C G T A C T G C T G A C T A G C G T A A G T C C G T A C T A G A T C G
p-value:1e-13
log p-value:-3.219e+01
Information Content per bp:1.820
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.3 +/- 25.4bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:CCTGTCYCAAGGC--
-----NTCAAGGTCA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCTGTCYCAAGGC--
-----BTCAAGGTCA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCTGTCYCAAGGC--
-NTGCCCANNGGTNA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T A C G T
A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

FOS::JUN/MA0099.2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGTCYCAAGGC
--TGACTCA----
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C
A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGTCYCAAGGC-
--TGCCCCAGGGCA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTGTCYCAAGGC-
--TGCCCCAGGGCA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CCTGTCYCAAGGC----
-------CAAGGHCANV
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTGTCYCAAGGC
TGCTGAGTCA----
 A C G T A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CCTGTCYCAAGGC-
--TGCCCCCGGGCA
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C A C G T
A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCTGTCYCAAGGC
---GTCACATGAY
 A T G C A G T C A C G T C T A G G C A T A G T C A G C T A G T C C G T A C G T A C T A G A C T G A G T C
A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C