Information for 6-GCCCCGTTGT (Motif 26)

A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A T C G A G T A C C T A G A C T G C T A G A C T G A G T C
p-value:1e-8
log p-value:-1.990e+01
Information Content per bp:1.868
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif34.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets62.9 +/- 21.2bp
Average Position of motif in Background48.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GCCCCGTTGT-
---CCTTTGTT
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGTTGT-----
TGTTCCCATTGTGTACT
 A C G T A C G T A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCCCCGTTGT
AGGVNCCTTTGT
 A C G T A C G T A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

SOX10/MA0442.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GCCCCGTTGT
----CTTTGT
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCCCCGTTGT--
--NCCATTGTTC
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GCCCCGTTGT-
---CCWTTGTY
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCCCGTTGT---
---CCWTTGTYYB
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCCCCGTTGT-
GACCCCCCGCTGTG
 A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

KLF13/MA0657.1/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:forward strand
Alignment:-------GCCCCGTTGT-
ATGCCACGCCCCTTTTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCCCCGTTGT---
---CCATTGTTNY
 A C T G A G T C A G T C G T A C A G T C A C T G A C G T A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T