Information for 5-GGGTGAGAGG (Motif 23)

C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G
Reverse Opposite:
T G A C A G T C C G A T A T G C C G A T T A G C C G T A A T G C G T A C G A T C
p-value:1e-8
log p-value:-2.030e+01
Information Content per bp:1.827
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif675.2
Percentage of Background Sequences with motif1.35%
Average Position of motif in Targets40.1 +/- 24.6bp
Average Position of motif in Background49.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2C2/MA0504.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGAGG---
AGGGGTCAGAGGTCA
 A C G T A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGAGG---
GAGGTCAAAGGTCA
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGAGAGG---
TGGGGCAAAGGTCA
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGAGG---
GTAGGGCAAAGGTCA
 A C G T A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGAGG
AGGGTAACAGC
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G
C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGGTGAGAGG-
TGAGTGACAGSC
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

RXRB/MA0855.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGAGG---
GGGGTCAAAGGTCA
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G T C A G C T A G C A T G A C G T A G T C C T G A C T G A T C G A C A T G C A T G A C G T A G T C T C G A

Nr2f6/MA0677.1/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGAGG---
GAGGTCAAAGGTCA
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G T C G A C A T G C A T G A C G T A G T C C G T A C T G A T C G A A C T G C A T G A C G T A G T C C T G A

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGGTGAGAGG---
GGGGTCAAAGGTCA
 A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G A C G T A C G T A C G T
T C A G T C A G C A T G C A T G A C G T A G T C C T G A C T G A C T G A C A T G C A T G A C G T A G T C T C G A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGTGAGAGG
GGTGYTGACAGS
 A C G T A C G T C T A G C A T G T A C G A C G T A T C G C G T A A T C G C G T A A C T G A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G