Information for 4-CCTAATGGAA (Motif 22)

A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A
Reverse Opposite:
A C G T A C G T A T G C G T A C G T C A G C A T C G A T C G T A C T A G C T A G
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.844
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif74.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets35.4 +/- 25.0bp
Average Position of motif in Background49.4 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CCTAATGGAA
-CTAATKGV-
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CCTAATGGAA---
---AATGGAAAAT
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCTAATGGAA---
---AATGGAAAAT
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFATC1/MA0624.1/Jaspar

Match Rank:4
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCTAATGGAA---
---NNTGGAAANN
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

BARX1/MA0875.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGAA
-NTAATTGN-
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A
A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T A G A G T C A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTAATGGAA---
---NATGGAAAAN
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGAA-
-ATGATGCAAT
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTAATGGAA-
-MTGATGCAAT
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

PB0135.1_Hoxa3_2/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTAATGGAA---
CCTTAATNGNTTTT
 A C G T A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A A C G T A C G T A C G T
A G T C A T G C G A C T C G A T C G T A C G T A A C G T T C A G A C T G G C A T C G A T G A C T C A G T A G C T

VENTX/MA0724.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CCTAATGGAA
-CTAATCGNT
 A G T C A G T C A C G T G C T A C G T A A C G T A C T G T A C G C G T A C G T A
A C G T G A T C A C G T C G T A C G T A C A G T A G T C C T A G A C T G G C A T