Information for 10-TWATATGTGGCCAAGG (Motif 21)

C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G
Reverse Opposite:
G T A C A G T C A G C T A C G T A C T G A C T G A T G C A T G C G C T A A T G C G T C A A C G T G T C A G A C T C G A T G T C A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.723
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 16.7bp
Average Position of motif in Background57.9 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:TWATATGTGGCCAAGG
--------TGCCAA--
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG
------CGTGCCAAG-
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TWATATGTGGCCAAGG----
------GTTGCCATGGNAAC
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.59
Offset:9
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG---
---------NTCAAGGTCA
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG---
-----NGTTGCCATGGCAA
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:6
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG---
-------AGGTCAAGGTCA
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:9
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG---
---------BTCAAGGTCA
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.57
Offset:11
Orientation:forward strand
Alignment:TWATATGTGGCCAAGG-----
-----------CAAGGHCANV
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TWATATGTGGCCAAGG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TWATATGTGGCCAAGG
----CTGTTGCTAGGS
 C A G T C G T A C G T A C A G T T C G A A C G T A T C G C A G T A T C G T A C G A G T C A G T C C G T A C T G A C T A G A C T G
A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G