Information for 11-TTTGCCAATTTGC (Motif 19)

A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
Reverse Opposite:
A C T G A G T C C T G A C T G A C T G A A G C T A C G T C T A G A C T G A G T C C G T A C G T A C G T A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 26.3bp
Average Position of motif in Background52.4 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TTTGCCAATTTGC
GGTGCCAAGT---
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TTTGCCAATTTGC
--TGCCAA-----
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTTGCCAATTTGC
CGTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTGCCAATTTGC
-TTGCCAAG----
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

POU3F3/MA0788.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TTTGCCAATTTGC
ATTATGCTAATTT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
C G T A C G A T C G A T C G T A A C G T C A T G A G T C G C A T C G T A C T G A G C A T C G A T C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TTTGCCAATTTGC
TATGCAAAT----
 A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

PH0155.1_Prrx2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TTTGCCAATTTGC---
NTTCGCTAATTAGCTNT
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C A C G T A C G T A C G T
G A C T G C A T G A C T G T A C T C A G G A T C A G C T C T G A C G T A G A C T A G C T C T G A C T A G A G T C C A G T A C G T G C A T

Pou2f3/MA0627.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTGCCAATTTGC
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTTGCCAATTTGC
TTGTATGCAAATTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C
A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--TTTGCCAATTTGC-
ACTATGCCAACCTACC
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T C A C T G A A G C T A G C T A G C T A C T G A G T C A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C