Information for 3-GCTSTKRRGGAGMWGA (Motif 6)

A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
Reverse Opposite:
G C A T A T G C C G A T A C T G A G T C A G C T A G T C G A T C A G T C A G C T G T A C C G T A T A C G C G T A T C A G A T G C
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.638
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.93%
Number of Background Sequences with motif373.8
Percentage of Background Sequences with motif0.74%
Average Position of motif in Targets42.1 +/- 26.5bp
Average Position of motif in Background47.8 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTKRRGGAGMWGA
NGCTTTCTAGGAAN---
 A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCTSTKRRGGAGMWGA
NSCACTYVAV-------
 A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GCTSTKRRGGAGMWGA
RSCACTYRAG-------
 A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCTSTKRRGGAGMWGA----
NNCCTGNAAAAAAAAAAAAA
 A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:GCTSTKRRGGAGMWGA
-TTCTNMGGAA-----
 A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCTSTKRRGGAGMWGA-
-------GGGAGGACNG
 A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCTSTKRRGGAGMWGA----
NNCCTGNAAAAAAAAAAAAA
 A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GCTSTKRRGGAGMWGA
AGGACGCTGTAAAGGGA----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----GCTSTKRRGGAGMWGA
AAGACGCTGTAAAGCGA----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----GCTSTKRRGGAGMWGA
AAGACGCTGTAAAGCGA----
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G C A T A T G C A C G T C A T G T C G A C T A G C T A G T C A G C T G A C T A G G T A C C G T A T A C G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A A C G T A C G T A C G T A C G T