Information for 12-CACATCAGGC (Motif 39)

A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G A C G T A C T G
p-value:1e-5
log p-value:-1.241e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.2 +/- 10.9bp
Average Position of motif in Background42.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CACATCAGGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---CACATCAGGC--
GAGCACAGCAGGACA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

ZBTB18/MA0698.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CACATCAGGC--
NAACATCTGGATN
 A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CACATCAGGC--
CACAGCAGGGGG
 A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CACATCAGGC
AACATCTGGA
 A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C
T G C A C T G A A T G C G T C A A C G T A T G C A C G T A C T G A C T G T G C A

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---CACATCAGGC--
CCACACAGCAGGAGA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CACATCAGGC----
DCHCAGCAGGRGGCC
 A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

SPDEF/MA0686.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CACATCAGGC-
TACATCCGGGT
 A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C A C G T
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACATCAGGC
DCTCAGCAGG-
 A C G T A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

ETV3/MA0763.1/Jaspar

Match Rank:10
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACATCAGGC
CACTTCCGGT
 A G T C C G T A A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C
A G T C T C G A A G T C C G A T C A G T G T A C G T A C C T A G C T A G A G C T