Information for 10-TAGTTTAGCA (Motif 37)

A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T C G T A C G T A C G T A A G T C A C G T C G T A
p-value:1e-6
log p-value:-1.458e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets26.0 +/- 9.0bp
Average Position of motif in Background62.9 +/- 13.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TAGTTTAGCA
ACTAGTTAAC--
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C A C G T A C G T

BARHL2/MA0635.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTTAGCA
ANCGTTTANN-
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TAGTTTAGCA
TATTGTTTATT-
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:4
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TAGTTTAGCA--
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TAGTTTAGCA--
--NNTTGGCANN
 A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TAGTTTAGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

FOXG1/MA0613.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCA
TTGTTTAC--
 A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TAGTTTAGCA
-GGATTAGC-
 A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGTTTAGCA----
ANATTTTTGCAANTN
 A C G T A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

Foxj2/MA0614.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TAGTTTAGCA
TTGTTTAC--
 A C G T C G T A A C T G A C G T A C G T A C G T C G T A A C T G A G T C C G T A
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T