Information for 17-GTCTGCTAAGAAC (Motif 36)

A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
Reverse Opposite:
A C T G C G A T C A G T G A T C G A C T A G C T C G T A C T A G A T G C C G T A C T A G C T G A T G A C
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.672
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.69%
Number of Background Sequences with motif102.5
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets58.7 +/- 24.2bp
Average Position of motif in Background46.1 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCTAAGAAC
VBSYGTCTGG-------
 A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTAAGAAC
CTGTCTGG-------
 A C G T A C G T A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTCTGCTAAGAAC---
--TTTCCAGGAAATGG
 A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C A C G T A C G T A C G T
A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTCTGCTAAGAAC-
--TTTCTNAGAAAN
 A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C A C G T
A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTAAGAAC
TWGTCTGV-------
 A C G T A C G T A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCTAAGAAC
NGCTTTCTAGGAAN
 A C G T A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCTGCTAAGAAC
--CTTCTGGGAAA
 A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GTCTGCTAAGAAC
-ATTTCCAAGAA-
 A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

PB0022.1_Gata5_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCTAAGAAC--
TAAACTGATAAGAAGAT
 A C G T A C G T A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTCTGCTAAGAAC
GTCAGCANNTN--
 A C T G A G C T A G T C C G A T A T C G A G T C G C A T T C G A C T G A C A T G G C T A G C T A T G A C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T