Information for 13-TCTTAMAKCAGASMYW (Motif 29)

A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
Reverse Opposite:
G C T A C T G A A C G T A T G C A G C T A G T C A C G T A C T G G T C A A C G T A C G T A C G T C G T A C G T A C T A G C G T A
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.844
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.4 +/- 17.5bp
Average Position of motif in Background48.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCTTAMAKCAGASMYW
-ATTGCATCAT-----
 A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCTTAMAKCAGASMYW
-ATTGCATCAK-----
 A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TCTTAMAKCAGASMYW
GCCATAAATCA------
 A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:4
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCTTAMAKCAGASMYW
GGCCATAAATCA------
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0066.1_Hoxc11/Jaspar

Match Rank:5
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTTAMAKCAGASMYW
TAAAGTCGTAAAATAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G A C G T A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----TCTTAMAKCAGASMYW
TAAAGTCGTAAAACAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

NFIL3/MA0025.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTTAMAKCAGASMYW
ANGTTACATAA------
 A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:TCTTAMAKCAGASMYW
----AAATCACAGCA-
 A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----TCTTAMAKCAGASMYW
TAAAGTCGTAAAACGT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCTTAMAKCAGASMYW
GGCCATAAATCA------
 A C G T A C G T A C G T A G T C A C G T A C G T C G T A T G C A C G T A A C G T A G T C C G T A A C T G C T G A A T C G G T C A A G C T C G A T
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T