Information for 12-GAGTGTTGGTGAG (Motif 27)

A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C C G T A A G T C A G T C C G T A C T G A A G T C C G T A A G T C A G C T A G T C
p-value:1e-8
log p-value:-2.023e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.5 +/- 5.6bp
Average Position of motif in Background36.2 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GAGTGTTGGTGAG
-TGCGTGGGYG--
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGTGTTGGTGAG
TTRAGTGSYK-----
 A C G T A C G T A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGTGTTGGTGAG
-NGCGTGGGCGGR
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

PB0150.1_Mybl1_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTTGGTGAG
CACGGCAGTTGGTNN-
 A C G T A C G T A C G T A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GAGTGTTGGTGAG---
-----CAGGTAAGTAT
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GAGTGTTGGTGAG
CTYRAGTGSY------
 A C G T A C G T A C G T A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAGTGTTGGTGAG--
NNNTGTTGTTGTTNG
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--GAGTGTTGGTGAG
TTGAGTGSTT-----
 A C G T A C G T A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GAGTGTTGGTGAG
------TGGGGA-
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GAGTGTTGGTGAG----
--GTNTTGTTGTGANNT
 A C T G C T G A A C T G A C G T A C T G A G C T A C G T A C T G A C T G A C G T A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T