Information for 6-ATTGTTGGCC (Motif 23)

C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
Reverse Opposite:
C A T G C T A G T A G C G T A C G T C A G T C A T A G C G C T A C T G A G C A T
p-value:1e-9
log p-value:-2.093e+01
Information Content per bp:1.672
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif5.34%
Number of Background Sequences with motif839.3
Percentage of Background Sequences with motif1.67%
Average Position of motif in Targets52.2 +/- 25.9bp
Average Position of motif in Background49.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:ATTGTTGGCC
ATTGTTA---
 C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:ATTGTTGGCC
ATTGTT----
 C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ATTGTTGGCC
----TTGGCA
 C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

PB0172.1_Sox1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTGGCC
CTATAATTGTTAGCG
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATTGTTGGCC--
---NTTGGCANN
 C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----ATTGTTGGCC--
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTGGCC
CCATTGTTNY--
 A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTGGCC
CCATTGTTC---
 A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATTGTTGGCC
CCATTGTTYB--
 A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTTGGCC--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T A T C G C A G T A C G T C A T G A T C G G A T C G T A C A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A