Information for 5-GGAACAGACA (Motif 22)

A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A
Reverse Opposite:
C A G T A C T G G C A T T G A C A C G T A C T G A G C T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.138e+01
Information Content per bp:1.828
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif410.6
Percentage of Background Sequences with motif0.82%
Average Position of motif in Targets56.5 +/- 26.7bp
Average Position of motif in Background49.8 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGACA
TGGAACAGMA-
 A C G T A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---GGAACAGACA
CCAGGAACAG---
 A C G T A C G T A C G T A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GGAACAGACA---
---CCAGACRSVB
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGAACAGACA--
GRAASTGAAAST
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T A C G T
T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAACAGACA-
CGGAAGTGAAAC
 A C G T A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGAACAGACA-
---CCAGACAG
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAACAGACA
TGGAAAA----
 A C G T A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GGAACAGACA
--AACCGANA
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A
A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGAACAGACA--
GGAAGTGAAAST
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GGAACAGACA-
---BCAGACWA
 A C T G A C T G T G C A T C G A G T A C G T C A A C T G C G T A T G A C G T C A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A