Information for 2-GCAWACAGTTCWGCTG (Motif 2)

A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G G T A C C G T A A T C G C G T A G T C A A G T C A C G T A C T G A C G T C G A T A C G T A C T G A G T C
p-value:1e-13
log p-value:-3.216e+01
Information Content per bp:1.775
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.5 +/- 30.5bp
Average Position of motif in Background35.3 +/- 15.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GCAWACAGTTCWGCTG--
----------CAGCTGNT
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCAWACAGTTCWGCTG
GGGRAARRGRMCAGMTG
 A C G T A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:3
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:GCAWACAGTTCWGCTG---
---------HCAGCTGDTN
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GCAWACAGTTCWGCTG
GTAAACAG--------
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GCAWACAGTTCWGCTG
GAAGAACAGGTGTCCG-
 A C G T A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCAWACAGTTCWGCTG
NNCNNAACAATTNT----
 A C G T A C G T A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:7
Score:0.53
Offset:10
Orientation:reverse strand
Alignment:GCAWACAGTTCWGCTG--
----------CAGCTGTT
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

PB0053.1_Rara_1/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCAWACAGTTCWGCTG
TCTCAAAGGTCACCTG
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

MYF6/MA0667.1/Jaspar

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCAWACAGTTCWGCTG
---AACAGCTGTT---
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G
A C G T A C G T A C G T T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCAWACAGTTCWGCTG-------
--------GTCWGCTGTYYCTCT
 A C T G T A G C T C G A C G T A C G T A G T A C C G T A C T A G A C G T A C G T A T G C C G A T A C T G A G T C C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T