Information for 2-ATCATCCATT (Motif 17)

G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T
Reverse Opposite:
G T C A T C G A A C G T A C T G A C T G C G T A A C G T C T A G T C G A A C G T
p-value:1e-9
log p-value:-2.301e+01
Information Content per bp:1.848
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif74.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets51.8 +/- 26.7bp
Average Position of motif in Background51.4 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ATCATCCATT------
NNCATTCATTCATNNN
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATCATCCATT
ATTTTCCATT
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATCATCCATT
TGAATTATGCAT-
 A C G T A C G T A C G T G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATCATCCATT--
GYCATCMATCAT
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T A C G T
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T

PAX3/MA0780.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATCATCCATT-
-TAATCGATTA
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T
A C G T C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

PAX7/MA0680.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCATCCATT-
-TAATCGATTA
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T
A C G T C G A T T G C A G T C A G A C T A G T C T C A G C G T A C G A T G A C T G C T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ATCATCCATT
GAATATTCAT-
 A C G T G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

CUX1/MA0754.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCATCCATT-
-TAATCGATAA
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCATCCATT
ATAATCCC--
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ATCATCCATT-
-TAATCAATTA
 G T C A A G C T A G T C G T C A A C G T G T A C A G T C C G T A A G C T A C G T A C G T
A C G T C G A T C T G A C G T A A G C T A G T C T G C A C T G A A C G T A G C T G C T A