Information for 8-GGGAGMTGCCCCCAGA (Motif 16)

C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
Reverse Opposite:
A C G T A T G C A G C T C A T G T A C G C T A G C T A G C A T G T A G C C G T A C A G T G A T C A C G T T A G C G A T C G A T C
p-value:1e-10
log p-value:-2.346e+01
Information Content per bp:1.686
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif144.1
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets62.2 +/- 24.5bp
Average Position of motif in Background52.8 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:GGGAGMTGCCCCCAGA--
------CGCCCCCTGACA
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0204.1_Zfp740_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA---
--AAATTCCCCCCGGAAGT
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A A C G T A C G T A C G T
A C G T A C G T C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA
-GGAAATTCCC-----
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA
-----CTGCCCGCA--
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGAGMTGCCCCCAGA
GGGAAATCCCCN----
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA--
------TGCCCCCGGGCA
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGAGMTGCCCCCAGA
-GGGGATTCCCCC---
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGGAGMTGCCCCCAGA
-GGAAATCCCC-----
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA--
------TGCCCCAGGGCA
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:GGGAGMTGCCCCCAGA--
------TGCCCCAGGGCA
 C A T G C A T G A C T G C G T A C T A G G T C A C G A T A C T G G T A C A G T C A G T C A T G C G T A C C T G A A T C G T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A