Information for 6-TTCACACAATACAACA (Motif 12)

A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
Reverse Opposite:
A C G T A C T G C G A T G A C T C A T G C A G T C G T A C A G T C G A T C T A G A C G T A T C G A C G T A C T G C G T A C G T A
p-value:1e-11
log p-value:-2.566e+01
Information Content per bp:1.697
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.6 +/- 18.9bp
Average Position of motif in Background35.1 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTCACACAATACAACA
TTMACACCTT------
 A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTCACACAATACAACA
TTCACACCTT------
 A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTCACACAATACAACA
NNTTTTCACACCTTNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTCACACAATACAACA
NTTTTCACACCTT------
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAATACAACA
TTTCACACCT-------
 A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAATACAACA
TTTCACACCTN------
 A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAATACAACA
CTTCACACCTA------
 A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTCACACAATACAACA
KTTCACACCT-------
 A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:9
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------TTCACACAATACAACA
GACCACATTCATACAAT------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTCACACAATACAACA
HTTTCCCASG--------
 A C G T A C G T A C G T A C G T A G T C G T C A A T G C T C G A A G T C C G T A G C T A G C A T G T C A G A T C C G T A C G T A G T A C T C G A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T