Homer de novo Motif Results (hs_CervixCarcinoma_HeLa_undef_GFP_SRX023661_homermotifs_10_13_16/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 763
Total background sequences = 48373
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 C T A G G A T C G T A C C G T A A T G C A G T C C G T A C T A G T C A G A C T G A C T G C A T G G T A C C T A G T A G C G A C T 1e-159-3.680e+0215.73%0.31%25.2bp (26.1bp)BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer(0.970)
More Information | Similar Motifs Found
motif file (matrix)
2 G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A 1e-24-5.563e+011.44%0.01%23.4bp (15.3bp)REST/MA0138.2/Jaspar(0.818)
More Information | Similar Motifs Found
motif file (matrix)
3 C G T A C G T A A G T C A C G T A C G T A C G T C G T A A C G T A G C T A C T G C T A G A G C T C G T A 1e-16-3.762e+010.92%0.00%19.5bp (0.5bp)PH0078.1_Hoxd13/Jaspar(0.716)
More Information | Similar Motifs Found
motif file (matrix)
4 A C T G A C T G A C T G C G T A G T C A C G T A A C G T A C T G A C G T C G T A A C T G A C G T A G T C A G T C C G T A A T G C 1e-14-3.278e+010.92%0.01%15.7bp (20.5bp)GFY(?)/Promoter/Homer(0.839)
More Information | Similar Motifs Found
motif file (matrix)
5 C G T A A C T G A T C G A C G T A G T C A C G T A C G T A G C T C G T A C T A G A G C T A G T C C G T A 1e-13-3.151e+010.79%0.00%24.8bp (0.0bp)PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer(0.643)
More Information | Similar Motifs Found
motif file (matrix)
6 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C 1e-13-3.151e+010.79%0.00%27.0bp (2.5bp)HOXD12/MA0873.1/Jaspar(0.594)
More Information | Similar Motifs Found
motif file (matrix)
7 A G C T A G T C A C G T A G T C A C G T C G T A A C G T A C G T A G T C C G T A A G C T C G T A A G T C C G A T A C G T A C T G 1e-13-3.151e+010.79%0.00%11.6bp (2.5bp)PB0129.1_Glis2_2/Jaspar(0.619)
More Information | Similar Motifs Found
motif file (matrix)
8 C G T A A G C T A G T C A C G T G T C A C G A T A C T G A G T C A C G T A C G T A C G T A T C G G T A C 1e-13-2.996e+010.92%0.01%31.1bp (21.7bp)Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer(0.579)
More Information | Similar Motifs Found
motif file (matrix)
9 G T A C G T C A A C G T A C T G A C T G T A C G T G A C C G T A C T G A A G T C C G T A C G T A C T A G 1e-12-2.959e+011.05%0.01%21.3bp (18.9bp)MF0011.1_HMG_class/Jaspar(0.625)
More Information | Similar Motifs Found
motif file (matrix)
10 C G T A C T G A A C T G C T G A C G T A A C T G A C T G A C G T C G T A C G T A A C G T A C G T A C T G 1e-12-2.796e+010.92%0.01%25.2bp (24.4bp)Sox1/MA0870.1/Jaspar(0.682)
More Information | Similar Motifs Found
motif file (matrix)
11 * G A T C A C G T A T C G C G T A A T G C G C A T A G C T A G C T C G T A A G T C A G C T C G T A A C T G A G C T A G C T A C G T 1e-11-2.732e+011.05%0.02%23.0bp (26.2bp)Nr2e1/MA0676.1/Jaspar(0.580)
More Information | Similar Motifs Found
motif file (matrix)
12 * C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C 1e-11-2.732e+011.05%0.02%24.7bp (27.7bp)REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer(0.615)
More Information | Similar Motifs Found
motif file (matrix)
13 * A T G C A G T C G T C A A C G T A T G C G T A C T C G A T A C G A T G C A G C T A G T C G A T C G C A T A T G C G T A C G A C T 1e-11-2.708e+011.57%0.08%27.4bp (24.0bp)ZNF263/MA0528.1/Jaspar(0.642)
More Information | Similar Motifs Found
motif file (matrix)
14 * T C G A A G C T C G A T A G T C A G T C T G C A C T G A C G T A C G T A A C T G G C T A T A C G G T C A A C G T A C T G C T G A 1e-11-2.641e+010.92%0.01%21.6bp (27.6bp)Mafb/MA0117.2/Jaspar(0.609)
More Information | Similar Motifs Found
motif file (matrix)
15 * A C T G A C T G A G T C A T G C C G T A A G T C A C G T A C T G C G T A A G T C A T C G A G T C C T G A 1e-11-2.557e+010.66%0.00%17.4bp (0.0bp)ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer(0.686)
More Information | Similar Motifs Found
motif file (matrix)
16 * C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A 1e-11-2.557e+010.66%0.00%28.8bp (0.0bp)PH0158.1_Rhox11_2/Jaspar(0.526)
More Information | Similar Motifs Found
motif file (matrix)
17 * A T C G A G C T A C T G A G T C A C G T A G T C A G T C C G T A G T C A C G A T A C T G G T A C A C G T G T C A C T A G A G T C 1e-11-2.557e+010.66%0.00%10.2bp (0.0bp)Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer(0.555)
More Information | Similar Motifs Found
motif file (matrix)
18 * C G A T A T G C A G C T A C G T A C T G A G T C A G T C A C G T G T C A A C G T A C G T A C T G C G T A C G T A A C G T G T C A 1e-11-2.557e+010.66%0.00%35.9bp (0.0bp)SD0002.1_at_AC_acceptor/Jaspar(0.593)
More Information | Similar Motifs Found
motif file (matrix)
19 * T G C A A T G C G T C A A C T G A T C G C G T A C G T A A C T G A C T G T G A C A C G T A C T G C G T A A C T G A C G T T A C G 1e-10-2.495e+010.79%0.01%27.3bp (25.6bp)Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer(0.595)
More Information | Similar Motifs Found
motif file (matrix)
20 * A G C T A C G T A C G T C G A T A C G T A G T C A T G C G T A C C G A T A C T G C G T A A C T G A C G T A G T C C G T A A T C G 1e-10-2.495e+010.79%0.01%19.4bp (17.9bp)Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer(0.621)
More Information | Similar Motifs Found
motif file (matrix)
21 * A C T G C G A T A C T G A G T C C G T A A G C T C G A T T A C G C G A T A G T C C G T A G A C T A T C G T A C G A C G T C A G T 1e-10-2.445e+011.31%0.06%23.0bp (18.2bp)Sox17/MA0078.1/Jaspar(0.689)
More Information | Similar Motifs Found
motif file (matrix)
22 * G T C A C A G T A C T G A G T C G T C A G T A C G T C A A C G T C T A G C T A G G C T A G A T C G T A C C G T A C G A T C A T G 1e-10-2.310e+011.18%0.05%14.8bp (24.2bp)Myc/MA0147.2/Jaspar(0.719)
More Information | Similar Motifs Found
motif file (matrix)
23 * A T G C C G T A A G C T G T C A C A G T C G A T A C G T A T G C G T C A G A T C G C A T C G A T C T A G A C G T A C G T T G A C 1e-9-2.293e+011.05%0.03%27.2bp (25.1bp)PB0146.1_Mafk_2/Jaspar(0.623)
More Information | Similar Motifs Found
motif file (matrix)
24 * T A G C C G T A C A T G G T C A C A G T A C T G A G C T A C G T A C G T C G T A A C T G A C G T A G T C A G T C C G T A G C T A 1e-9-2.247e+011.44%0.09%29.0bp (25.6bp)ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer(0.722)
More Information | Similar Motifs Found
motif file (matrix)
25 * T C A G G T C A C G A T C T G A A C G T C G A T A T G C G A C T C A G T C T A G 1e-9-2.229e+019.17%3.99%25.8bp (27.8bp)SD0003.1_at_AC_acceptor/Jaspar(0.771)
More Information | Similar Motifs Found
motif file (matrix)
26 * C G T A C G T A T G A C A C T G A G C T A C G T C G T A G C T A G T A C C G T A 1e-8-2.070e+011.44%0.11%25.9bp (30.5bp)PB0109.1_Bbx_2/Jaspar(0.814)
More Information | Similar Motifs Found
motif file (matrix)
27 * A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C 1e-8-1.980e+010.52%0.00%25.6bp (6.2bp)NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer(0.844)
More Information | Similar Motifs Found
motif file (matrix)
28 * A C T G A G T C A C G T G T C A C T A G A T G C A C G T A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A G C T 1e-8-1.980e+010.52%0.00%37.4bp (0.0bp)PB0093.1_Zfp105_1/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
29 * C G A T C T G A A G T C C G T A C T A G C T G A C G T A T A G C A C G T C G A T G T C A A C G T A T G C 1e-8-1.883e+011.31%0.10%26.2bp (23.7bp)ZBTB18/MA0698.1/Jaspar(0.634)
More Information | Similar Motifs Found
motif file (matrix)
30 * A C G T C G A T A C G T A T C G C G T A A C G T A C T G A G T C A G T C C G A T A G T C A C G T A C T G 1e-8-1.867e+010.66%0.01%20.1bp (4.7bp)PH0064.1_Hoxb9/Jaspar(0.617)
More Information | Similar Motifs Found
motif file (matrix)
31 * A C G T C G T A C G T A C G T A G T C A C T G A C T G A C G T A C G T A C G T A A C G T A C G T G T C A 1e-8-1.867e+010.66%0.01%15.7bp (22.3bp)PB0182.1_Srf_2/Jaspar(0.681)
More Information | Similar Motifs Found
motif file (matrix)
32 * T C G A G C T A A C G T T A C G C T G A A T C G A G C T G T A C C G T A A G C T C T G A C A T G A G T C 1e-7-1.772e+011.70%0.22%27.1bp (28.6bp)JDP2/MA0655.1/Jaspar(0.836)
More Information | Similar Motifs Found
motif file (matrix)
33 * A C T G A T G C A G T C A G T C A G T C A G T C G T C A C T G A A C T G A G T C A C G T A G T C C T A G 1e-7-1.757e+010.66%0.01%11.1bp (17.0bp)PB0201.1_Zfp281_2/Jaspar(0.621)
More Information | Similar Motifs Found
motif file (matrix)
34 * C G T A C G T A A C G T C G T A A C G T A C T G A C G T A C G T C G T A A C T G A C G T A C T G A G T C 1e-7-1.704e+010.52%0.01%16.3bp (18.7bp)ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer(0.608)
More Information | Similar Motifs Found
motif file (matrix)
35 * A C G T C G T A C G T A C G T A C A G T C T G A C G T A C G T A C G T A A C T G A C T G A G C T A G T C A G T C C G T A A C T G 1e-7-1.704e+010.52%0.00%10.4bp (10.8bp)PB0049.1_Nr2f2_1/Jaspar(0.606)
More Information | Similar Motifs Found
motif file (matrix)
36 * G T A C A C G T A G T C C G A T C T G A A G T C A G T C C G T A C G T A C G T A A G T C G T A C C G T A C G T A G T A C A G T C 1e-7-1.704e+010.52%0.01%10.1bp (12.3bp)PH0026.1_Duxbl/Jaspar(0.583)
More Information | Similar Motifs Found
motif file (matrix)
37 * A G C T C T A G A C T G C G T A A C G T A C G T C G T A C G T A C G A T A C T G G T A C A C T G A G C T A G C T A G T C A G C T 1e-7-1.704e+010.52%0.00%26.1bp (12.6bp)Pitx1/MA0682.1/Jaspar(0.640)
More Information | Similar Motifs Found
motif file (matrix)
38 * A G C T G T C A C G T A A C T G C T G A A T G C A G C T A G T C A C T G A G T C 1e-6-1.533e+011.57%0.22%30.2bp (29.5bp)ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer(0.586)
More Information | Similar Motifs Found
motif file (matrix)
39 * T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C 1e-6-1.426e+011.97%0.40%23.2bp (28.4bp)Zfx/MA0146.2/Jaspar(0.664)
More Information | Similar Motifs Found
motif file (matrix)
40 * A C G T A C T G A C G T C A G T A C G T C T A G A C G T A C G T A C G T A C G T A G C T C A T G A C G T A C G T A C G T A C T G 1e-6-1.426e+010.39%0.00%26.5bp (0.0bp)FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer(0.720)
More Information | Similar Motifs Found
motif file (matrix)
41 * A G T C A C G T A G T C A G T C A C G T A G T C C G A T C G T A A G T C A C T G 1e-2-6.829e+000.26%0.01%20.9bp (40.3bp)PB0203.1_Zfp691_2/Jaspar(0.612)
More Information | Similar Motifs Found
motif file (matrix)