Information for 6-CCAGSTGGVCTYC (Motif 8)

A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
Reverse Opposite:
T A C G C T A G G T C A A C T G A G C T A G T C A G T C G C T A T A G C A T G C A C G T T C A G A C T G
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.658
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif439.0
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets48.9 +/- 23.6bp
Average Position of motif in Background49.9 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:CCAGSTGGVCTYC
VCAGCTGBNN---
 A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCAGSTGGVCTYC
AACAGGTGNT----
 A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---CCAGSTGGVCTYC
NNVVCAGCTGBN----
 A C G T A C G T A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCAGSTGGVCTYC
NNCCACGTGG-----
 A C G T A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCAGSTGGVCTYC
NNCAGGTGNN----
 A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCAGSTGGVCTYC
NAACAGCTGG-----
 A C G T A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CCAGSTGGVCTYC
DCHCAGCAGGRGGCC
 A C G T A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCAGSTGGVCTYC
AACAGATGGC----
 A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCAGSTGGVCTYC
VNAVCAGCTGGC----
 A C G T A C G T A C G T A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CCAGSTGGVCTYC
CCACGTGGNN---
 A G T C A G T C C G T A A T C G A T C G C G A T A C T G A C T G T C G A T G A C C A G T G A T C A T G C
T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C A C G T A C G T A C G T