Information for 2-GCGTCARTCY (Motif 4)

A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
Reverse Opposite:
C T A G T C A G T C G A G A C T A C G T A C T G C G T A A G T C A T C G A G T C
p-value:1e-12
log p-value:-2.789e+01
Information Content per bp:1.773
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif159.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets42.5 +/- 30.1bp
Average Position of motif in Background50.5 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.71
Offset:-6
Orientation:forward strand
Alignment:------GCGTCARTCY
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GCGTCARTCY-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0157.1_Rara_2/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GCGTCARTCY
AGAGCGGGGTCAAGTA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCGTCARTCY
ACGTCA----
 A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
C T G A A G T C T C A G A C G T G T A C C G T A A C G T A C G T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCGTCARTCY
TGACGTCA----
 A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A A C G T A C G T A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCGTCARTCY
TACGTCAT---
 A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGTCARTCY
AGRGGTCA----
 A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----GCGTCARTCY
NTTATTCGTCATNC-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCGTCARTCY
AGGTCA----
 A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GCGTCARTCY-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C G T A G T C G T C A C T G A A G C T A G T C A G T C A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C