Information for 7-CAGGNAACTTCAG (Motif 8)

A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G G C T A C T G A C T A G A C G T A G C T A C G T A T G C A G T C A G C T A C T G
p-value:1e-12
log p-value:-2.779e+01
Information Content per bp:1.829
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.9 +/- 27.7bp
Average Position of motif in Background38.2 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGGNAACTTCAG
---NAAACCACAG
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CAGGNAACTTCAG-
----AAACCACAGC
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGGNAACTTCAG
NACAGGAAAT-----
 A C G T A C G T A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAGGNAACTTCAG-
----AAACCACANN
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGGNAACTTCAG--
----AAACCACAGAN
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGGNAACTTCAG
NACAGGAAAT-----
 A C G T A C G T A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGNAACTTCAG
-AGGAAACAGCTG
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGGNAACTTCAG
----AAACCGCAA
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CAGGNAACTTCAG----
NNGAGGTTACTNNAGGTCA
 A C G T A C G T A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A

LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGNAACTTCAG----
-GGGTTACTANAGGTCA
 A G T C C T G A A C T G A T C G C G T A C T G A C G T A A G T C A G C T C A G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T C T A G C A T G C A T G A G C T G A C T C G T A G A T C A G C T G T C A A T G C T C G A C T A G C A T G A C G T A G T C C T G A