Information for 3-TACACGTGACTGG (Motif 4)

A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
Reverse Opposite:
T A G C A G T C C T G A A C T G A C G T A G T C G T C A G A T C A C T G A C G T A C T G A C G T C G T A
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.816
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 26.8bp
Average Position of motif in Background25.1 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arntl/MA0603.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TACACGTGACTGG
-NCACGTGACN--
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TACACGTGACTGG
-TCACGTGACCGG
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TACACGTGACTGG
KCCACGTGAC---
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:TACACGTGACTGG
-NCACGTGACN--
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TACACGTGACTGG
ACCACGTGAC---
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:6
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TACACGTGACTGG
GCCACGTGACC--
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TACACGTGACTGG
ATCACGTGAC---
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.76
Offset:0
Orientation:forward strand
Alignment:TACACGTGACTGG
ATCACGTGAC---
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:TACACGTGACTGG
--CACGTGDC---
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C G T A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TACACGTGACTGG
-TCACGTGACC--
 A C G T G T C A A G T C C G T A A G T C C T A G A C G T A C T G C G T A A G T C A G C T C T A G A T C G
A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C A C G T A C G T