Information for 18-GAGGAAAGAC (Motif 27)

A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T C G A T A C G T A G T C A G T C A C G T A G T C
p-value:1e-6
log p-value:-1.472e+01
Information Content per bp:1.958
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets70.0 +/- 20.6bp
Average Position of motif in Background55.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGGAAAGAC
AGAGGAA----
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:2
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAAAGAC
NDCAGGAARTNN
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAGGAAAGAC--
--GGAAANCCCC
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GAGGAAAGAC
NACAGGAAAT--
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAAAGAC
NNTGGAAANN-
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

RELA/MA0107.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GAGGAAAGAC--
--GGAAATTCCC
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGAAAGAC---
-AGGAAACAGCTG
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T T C G A A C T G A C T G C G T A C G T A T C G A A G T C C T G A A T C G G T A C G C A T C A T G

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAAAGAC
AATGGAAAAT-
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAGGAAAGAC--
--GGAAATCCCC
 A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C A C G T A C G T
A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAGGAAAGAC
AATGGAAAAT-
 A C G T A C T G C G T A A C T G A C T G C G T A C G T A C G T A A C T G C G T A A G T C
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T