Information for 13-CAAAGCAAAC (Motif 23)

G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C
Reverse Opposite:
T C A G A G C T G C A T C G A T A C T G G T A C A C G T G C A T C G A T A C T G
p-value:1e-9
log p-value:-2.170e+01
Information Content per bp:1.820
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.42%
Number of Background Sequences with motif188.2
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets45.5 +/- 22.1bp
Average Position of motif in Background51.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CAAAGCAAAC---
TGCCAAAATAAACANN
 A C G T A C G T A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CAAAGCAAAC-
-WAAGTAAAYA
 G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T
A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAC-
-AAAGTAAACA
 G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CAAAGCAAAC-----
CAAAGTAAACANNNN
 G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CAAAGCAAAC-
-AAAGTAAACA
 G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0121.1_Foxj3_2/Jaspar

Match Rank:6
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----CAAAGCAAAC--
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCAAAC---
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAAAGCAAAC-
NCTAAGTAAACA
 A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAAAGCAAAC--
ATATCAAAACAAAACA
 A C G T A C G T A C G T A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0083.1_Tcf7_1/Jaspar

Match Rank:10
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGCAAAC
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C G C T A C G T A C G T A C A T G G T A C C G T A C G T A C T G A A G T C
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A