Information for 11-TCGGGTAGAG (Motif 20)

A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G
Reverse Opposite:
A G T C A C G T A T G C A C G T G T C A A G T C A G T C A G T C A T C G C G T A
p-value:1e-9
log p-value:-2.213e+01
Information Content per bp:1.860
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif21.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets63.1 +/- 26.2bp
Average Position of motif in Background54.1 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCGGGTAGAG---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0199.1_Zfp161_2/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCGGGTAGAG---
GCCGCGCAGTGCGT
 A C G T A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGGGTAGAG----
TGGGGCAAAGGTCA
 A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TCGGGTAGAG----
GTAGGGCAAAGGTCA
 A C G T A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCGGGTAGAG
CCAGGAACAG
 A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TCGGGTAGAG----
--GGTTAGAGACCT
 A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGGGTAGAG--
TGGGGAAGGGCM
 A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

PB0179.1_Sp100_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TCGGGTAGAG-
TCCGTCGCTTAAAAG
 A C G T A C G T A C G T A C G T A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T
A G C T A T G C G A T C T C A G G C A T T G A C A C T G G A T C A C G T C A G T G C T A C G T A G C T A C G T A A C T G

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCGGGTAGAG-
GTGGGGGAGGGG
 A C G T A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCGGGTAGAG----
TAGGGCAAAGGTCA
 A C G T A T G C C T A G T A C G A C T G C A G T C G T A A T C G C G T A C T A G A C G T A C G T A C G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A