Information for 13-AATTTTAAATATG (Motif 18)

C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
Reverse Opposite:
T G A C C G T A C A G T G C T A C A G T A G C T A C G T C G T A T G C A C T G A C T G A C A G T C G A T
p-value:1e-10
log p-value:-2.423e+01
Information Content per bp:1.759
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif144.3
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets50.1 +/- 25.2bp
Average Position of motif in Background48.5 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AATTTTAAATATG
NATTCAAAT----
 C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAATATG
CGGTTTCAAA----
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAATATG
AAATAAGAAAAAAC
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAAATATG--
NANTTATATATAANGN
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0064.1_Sox14_1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATTTTAAATATG
GCTAATTATAATTATC
 A C G T A C G T A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

FOXB1/MA0845.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AATTTTAAATATG
-TATGTAAATAT-
 C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATTTTAAATATG
TTTAATTATAATTAAG
 A C G T A C G T A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0145.1_Mafb_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AATTTTAAATATG-
CAATTGCAAAAATAT
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

PB0187.1_Tcf7_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAAATATG-
NNNTTTNTAATACNG
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

PB0001.1_Arid3a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-AATTTTAAATATG---
NNNTTTTAATTAANNNN
 A C G T C G T A G C T A A G C T A G C T A C G T C G A T C G T A C T G A G T C A C G A T G T C A C G A T A C T G A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C