Information for 8-AAGGCTTAGT (Motif 16)

C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
Reverse Opposite:
G C T A A G T C C A G T C G T A C G T A A C T G A G T C G T A C A C G T A G C T
p-value:1e-10
log p-value:-2.440e+01
Information Content per bp:1.833
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.57%
Number of Background Sequences with motif53.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets50.8 +/- 25.0bp
Average Position of motif in Background56.3 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--AAGGCTTAGT
AAGAGGATTAG-
 A C G T A C G T C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTAGT
NGGGATTA--
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AAGGCTTAGT
--GGATTAGC
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTAGT
VRGGATTARN
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PH0138.1_Pitx2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGGCTTAGT----
TGAAGGGATTAATCATC
 A C G T A C G T A C G T C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PITX3/MA0714.1/Jaspar

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTAGT
-GGGATTANN
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Dmbx1/MA0883.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGGCTTAGT---
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----AAGGCTTAGT---
TGAACCGGATTAATGAA
 A C G T A C G T A C G T A C G T C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:AAGGCTTAGT
-GGGATTAA-
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AAGGCTTAGT
NNGGATTAGN
 C T G A T G C A A C T G C T A G T A G C A C G T A C G T G T C A C T A G C G A T
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C