Information for 6-CTCTTGATTA (Motif 13)

A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A
Reverse Opposite:
C G A T C T G A G T C A A C G T A T G C C G T A C G T A C A T G C G T A C T A G
p-value:1e-10
log p-value:-2.458e+01
Information Content per bp:1.840
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif141.0
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets41.1 +/- 23.9bp
Average Position of motif in Background49.1 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Dux/MA0611.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CTCTTGATTA-
---TTGATTGN
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

PH0016.1_Cux1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTCTTGATTA-----
ACCGGTTGATCACCTGA
 A C G T A C G T A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
C T G A A T G C G A T C T C A G T C A G G A C T G C A T C T A G C T G A C G A T G A T C G C T A G T A C T A G C C G A T A T C G C T G A

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTCTTGATTA
NTATCGATTA
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A
C A G T A C G T C G T A G C A T A G T C T C A G T C G A G A C T G A C T C T G A

PH0153.1_Prop1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTGATTA-----
GNNTNTTAATTAATNCN
 A C G T A C G T A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PH0026.1_Duxbl/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTCTTGATTA-----
NNNNGTTGATTGGGTCG
 A C G T A C G T A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CTCTTGATTA------
---NTGATTAAATTAN
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

LMX1A/MA0702.1/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTCTTGATTA-
---TTAATTAA
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A G C T G A C T G C T A C G T A C G A T G A C T C T G A T C G A

CUX2/MA0755.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTCTTGATTA
TTATCGATTA
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A

LMX1B/MA0703.1/Jaspar

Match Rank:9
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CTCTTGATTA-
---TTAATTAN
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T
A C G T A C G T A C G T A G C T C G A T G C T A G C T A C G A T G C A T C T G A T G C A

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTTGATTA--
--ATTGATTYND
 A G T C C G A T G T A C A C G T C G A T A T C G G T C A A C G T A G C T C G T A A C G T A C G T
A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T