Information for 1-ACTACAAYTCCCA (Motif 1)

G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
Reverse Opposite:
A G C T A C T G A C T G A C T G C G T A C T A G C G A T A G C T A C T G C A G T C T G A A C T G A C G T
p-value:1e-57
log p-value:-1.320e+02
Information Content per bp:1.800
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif6.17%
Number of Background Sequences with motif90.4
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets51.9 +/- 21.7bp
Average Position of motif in Background51.1 +/- 37.5bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.95
Offset:0
Orientation:forward strand
Alignment:ACTACAAYTCCCA
ACTACAATTCCC-
G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAYTCCCA------
RACTACAACTCCCAGVAKGC
A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-ACTACAAYTCCCA------
AACTACAATTCCCAGAATGC
A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAYTCCCA
NWAACCACADNN----
A C G T A C G T A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

PB0032.1_IRC900814_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----ACTACAAYTCCCA
ATTTACGACAAATAGC-
A C G T A C G T A C G T A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:ACTACAAYTCCCA-------
-----ATTTCCCAGVAKSCY
G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:ACTACAAYTCCCA--
-----HTTTCCCASG
G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---ACTACAAYTCCCA
NAAACCACAG------
A C G T A C G T A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--ACTACAAYTCCCA
AAACCACAGC-----
A C G T A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--ACTACAAYTCCCA
AAACCACANN-----
A C G T A C G T G T C A A G T C A G C T G C T A A G T C C T G A G C T A G A T C G A C T A G T C A G T C A G T C C T G A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T