Information for 6-AGYRTTCWTGYTA (Motif 9)

C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A
Reverse Opposite:
C G A T C G T A C T A G A G T C C G T A C G T A A C T G C G T A C G T A A G C T C T A G A G T C A C G T
p-value:1e-11
log p-value:-2.658e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.5 +/- 11.6bp
Average Position of motif in Background63.0 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0178.1_Sox8_2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGYRTTCWTGYTA--
-ACATTCATGACACG
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGYRTTCWTGYTA-
GACCACATTCATACAAT
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-8
Orientation:forward strand
Alignment:--------AGYRTTCWTGYTA----
YTKGATAHAGTATTCTWGGTNGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
G A T C G C A T A C T G C T A G C T G A A G C T G C T A G C T A C T G A T C A G G C A T T G C A A C G T A C G T G A T C G A C T G C A T C T A G T A C G G A C T C T A G C A T G C T A G G T A C T C G A

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGYRTTCWTGYTA
-RCATTCCWGG--
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A
A C G T C T G A T G A C C T G A A C G T C G A T A G T C A G T C G C T A C T A G T A C G A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AGYRTTCWTGYTA---
-CTATAATTGTTAGCG
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T
A C G T G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G

PH0085.1_Irx4/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGYRTTCWTGYTA----
AATATACATGTAAAACA
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGYRTTCWTGYTA-
NNNTGTTGTTGTTNG
 A C G T C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGYRTTCWTGYTA
GAATATTCAT----
 A C G T C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

PB0139.1_Irf5_2/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AGYRTTCWTGYTA--
NNAATTCTCGNTNAN
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A T C G T A C G C T G A C T G A G A C T G A C T T A G C A G C T A G T C C A T G C T A G G C A T G A T C C G T A T C G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGYRTTCWTGYTA--
----TTCTTGGAAAN
 C G T A A C T G A G T C C T G A A C G T A C G T G T A C C G A T A C G T A C T G A G T C A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T