Information for 4-ARGCAAYTGCRRT (Motif 5)

C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
Reverse Opposite:
C G T A A G C T A G T C A T C G G T A C G T C A C T G A A C G T A C G T A C T G A G T C A G C T A C G T
p-value:1e-13
log p-value:-3.072e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.2 +/- 32.2bp
Average Position of motif in Background43.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ARGCAAYTGCRRT
AAGGCAAGTGT---
 A C G T C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ARGCAAYTGCRRT
-CGCAGCTGCG--
 C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

SOX4/MA0867.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ARGCAAYTGCRRT---
GAACAATTGCAGTGTT
 C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T A C G T A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

PH0007.1_Barx1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ARGCAAYTGCRRT--
AAAGTAATTAGTGAAT
 A C G T C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T A C G T A C G T
G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

Sox11/MA0869.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ARGCAAYTGCRRT---
-AACAATTTCAGTGTT
 C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T A C G T A C G T A C G T
A C G T C G T A C G T A A G T C C G T A C G T A A C G T A G C T C A G T A G T C C G T A A C T G A C G T A C T G A C G T A G C T

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ARGCAAYTGCRRT-
CGACCAACTGCCGTG
 A C G T C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

GFY(?)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ARGCAAYTGCRRT
-GGGAATTGTAGT
 C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ARGCAAYTGCRRT
NNACAGCTGC---
 C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ARGCAAYTGCRRT--
CGACCAACTGCCATGC
 A C G T C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ARGCAAYTGCRRT
ATATGCAAATNNN--
 A C G T A C G T C G T A C T G A A C T G A G T C C G T A C G T A A G C T A C G T A C T G A T G C C T A G C T G A A C G T
C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A A C G T A C G T