Information for 6-STCAGGGCTCAGG (Motif 12)

T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G
Reverse Opposite:
A G T C G T A C C A G T A T C G C T G A A T C G G A T C G T A C A G T C C G A T A C T G T G C A A T G C
p-value:1e-8
log p-value:-2.032e+01
Information Content per bp:1.688
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.59%
Number of Background Sequences with motif488.2
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets48.6 +/- 29.2bp
Average Position of motif in Background48.8 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0118.1_Esrra_2/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-STCAGGGCTCAGG---
GGCGAGGGGTCAAGGGC
 A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-STCAGGGCTCAGG---
NTNNNGGGGTCANGNNN
 A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STCAGGGCTCAGG---
CTCCAGGGGTCAATTGA
 A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-STCAGGGCTCAGG
WDNCTGGGCA----
 A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:STCAGGGCTCAGG----
-----GCCTCAGGGCAT
 T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:STCAGGGCTCAGG---
--TAGGGCAAAGGTCA
 T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T A C G T
A C G T A C G T A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:STCAGGGCTCAGG-
--WTGSCCTSAGGS
 T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T
A C G T A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:STCAGGGCTCAGG--
----AGCCTCAGGCA
 T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

PB0099.1_Zfp691_1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--STCAGGGCTCAGG--
CGAACAGTGCTCACTAT
 A C G T A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

INSM1/MA0155.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-STCAGGGCTCAGG
TGTCAGGGGGCG--
 A C G T T A C G A C G T T G A C G C T A T C A G A C T G C T A G A T G C G A C T A T G C G T C A C A T G T A C G
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T A C G T