Information for 8-WGGACAGGCTGWT (Motif 16)

C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T
Reverse Opposite:
C G T A C G T A A G T C C G T A A C T G A G T C A G T C C G A T A C T G A C G T A T G C A T G C C G A T
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.5 +/- 19.0bp
Average Position of motif in Background44.3 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-WGGACAGGCTGWT-
VAGRACAKNCTGTBC
 A C G T C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WGGACAGGCTGWT---
AGNACAGNCTGTTCTN
 C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WGGACAGGCTGWT-
VAGRACAKWCTGTYC
 A C G T C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-WGGACAGGCTGWT--
NAGNACANNNTGTNCT
 A C G T C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T A C G T
T A C G C T G A C T A G T C G A C G T A A G T C C T G A A T C G G C A T T A G C G A C T A C T G A C G T A G C T A G T C G A C T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WGGACAGGCTGWT-
AAGAACATWHTGTTC
 A C G T C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T
C G T A C T G A C T A G C G T A C G T A A G T C C G T A C A G T G C A T G T C A C G A T A C T G A C G T G C A T G A T C

PB0151.1_Myf6_2/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:WGGACAGGCTGWT---
-GGNGCGNCTGTTNNN
 C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T A C G T A C G T
A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:forward strand
Alignment:WGGACAGGCTGWT-
----CCTGCTGAGH
 C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WGGACAGGCTGWT
TTGACAGC-----
 C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:WGGACAGGCTGWT
TTGACAGG-----
 C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---WGGACAGGCTGWT
NNATTGACAGGTGCTT
 A C G T A C G T A C G T C G T A A T C G A T C G G T C A A G T C C G T A A C T G A C T G A G T C A C G T A C T G C G A T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T