Information for 7-GCGCGTAGGA (Motif 11)

A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C A C G T C G T A A G T C A C T G A G T C A C T G A G T C
p-value:1e-10
log p-value:-2.482e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 28.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGTAGGA
BGCACGTA---
 A C G T A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGCGTAGGA
GCACGTACCC
 A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCGCGTAGGA--
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A A C G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCGCGTAGGA------
TCGCGAAGGTTGTACT
 A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGCGTAGGA----
TGCGGAGTGGGACTGG
 A C G T A C G T A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCGCGTAGGA
GCACGTAY--
 A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCGCGTAGGA--
-TGCGTGGGCGT
 A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A A C G T A C G T
A C G T G A C T T C A G G T A C T C A G A C G T T C A G A C T G T C A G G A T C T C A G C A G T

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGCGTAGGA
NNCGCGTGNN-
 A C G T A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------GCGCGTAGGA
NNGCNCTGCGCGGC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCGCGTAGGA
GCACGTNC--
 A C T G A G T C A C T G A G T C A C T G A C G T C G T A A C T G A T C G C G T A
A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C A C G T A C G T