Information for 7-GCGGAGAGAG (Motif 8)

A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
Reverse Opposite:
A G T C A G C T G A T C G C A T A T G C G A C T G A T C A T G C T A C G T A G C
p-value:1e-9
log p-value:-2.298e+01
Information Content per bp:1.652
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif11.73%
Number of Background Sequences with motif2894.7
Percentage of Background Sequences with motif5.99%
Average Position of motif in Targets49.3 +/- 28.7bp
Average Position of motif in Background49.9 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0140.1_Irf6_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCGGAGAGAG--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GCGGAGAGAG
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGGAGAGAG
-CGGAGC---
 A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:4
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCGGAGAGAG
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G

PB0138.1_Irf4_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GCGGAGAGAG--
GNNACCGAGAATNNN
 A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G A C G T A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCGGAGAGAG
-TGGGGA---
 A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCGGAGAGAG-----
TGCGGAGTGGGACTGG
 A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.51
Offset:-8
Orientation:reverse strand
Alignment:--------GCGGAGAGAG
NNTNNGGGGCGGNGNGN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---GCGGAGAGAG-
GCCGCGCAGTGCGT
 A C G T A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G A C G T
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGAGAG
GGGCGGGAAGG-
 A C G T A C G T A T C G A T G C T A C G C T A G C T G A T A C G C G T A C T A G T C G A T C A G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T