Information for 9-ACGTTAATATGGA (Motif 14)

C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
Reverse Opposite:
A C G T A T G C A G T C C G T A A C G T T C G A A C G T A C G T C T G A C G T A A G T C C T A G A C G T
p-value:1e-10
log p-value:-2.449e+01
Information Content per bp:1.851
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 26.8bp
Average Position of motif in Background26.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ACGTTAATATGGA
TATGTAAATAT---
 A C G T C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACGTTAATATGGA--
AYATGYATATGCATR
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACGTTAATATGGA---
-CTTTGTTATGCAAAT
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ACGTTAATATGGA
TATGTAAATAT---
 A C G T C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACGTTAATATGGA
----ACATATGG-
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGTTAATATGGA---
-CATTGTTATGCAAAT
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ACGTTAATATGGA
ATGTAAACADGS-
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C A C G T

PH0087.1_Irx6/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ACGTTAATATGGA----
ANTTNTACATGTANTTN
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G A T G C A T A C G T C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G A C T C G A T C G A T C G A T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:ACGTTAATATGGA---
----CAAGATGGCGGC
 C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

FOXA1/MA0148.3/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACGTTAATATGGA
CAAAGTAAACANNNN
 A C G T A C G T C G T A A G T C C T A G A C G T A G C T G T C A C G T A A C G T C G T A A C G T A C T G A T C G C G T A
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A