p-value: | 1e-10 |
log p-value: | -2.507e+01 |
Information Content per bp: | 1.650 |
Number of Target Sequences with motif | 94.0 |
Percentage of Target Sequences with motif | 10.10% |
Number of Background Sequences with motif | 2265.8 |
Percentage of Background Sequences with motif | 4.75% |
Average Position of motif in Targets | 48.1 +/- 26.7bp |
Average Position of motif in Background | 50.9 +/- 29.7bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AACAAAGGCC AACAAAGG-- |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 2 |
Score: | 0.83 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AACAAAGGCC-- AGAAGAACAAAGGACTA |
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Sox3/MA0514.1/Jaspar
Match Rank: | 3 |
Score: | 0.82 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACAAAGGCC AAAACAAAGG-- |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 4 |
Score: | 0.82 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----AACAAAGGCC-- ATAAGAACAAAGGACTA |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 5 |
Score: | 0.80 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AACAAAGGCC RACAAWGG-- |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 6 |
Score: | 0.80 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACAAAGGCC GGAACAAAGR-- |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.79 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AACAAAGGCC GAACAATGGN- |
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Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer
Match Rank: | 8 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACAAAGGCC VRRACAAWGG-- |
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Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer
Match Rank: | 9 |
Score: | 0.75 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AACAAAGGCC RAACAATGGN- |
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Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer
Match Rank: | 10 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACAAAGGCC RNAACAATGG-- |
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