Information for 5-WSWTMTGCATGAC (Motif 6)

C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C C G T A A C G T A C T G A G T C C G T A A C G T C G T A C G A T A T C G C G T A
p-value:1e-11
log p-value:-2.561e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.4 +/- 15.4bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.70
Offset:7
Orientation:forward strand
Alignment:WSWTMTGCATGAC
-------CATGAC
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WSWTMTGCATGAC
TTCATTTGCATAT-
 A C G T C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:WSWTMTGCATGAC----
--ATTTGCATAACAAAG
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G

PH0148.1_Pou3f3/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-WSWTMTGCATGAC---
AAAATATGCATAATAAA
 A C G T C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.68
Offset:6
Orientation:reverse strand
Alignment:WSWTMTGCATGAC-
------NCGTGACN
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:WSWTMTGCATGAC
GHATATKCAT---
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:WSWTMTGCATGAC
--ATTTGCATAA-
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WSWTMTGCATGAC
CTCATTTGCATW--
 A C G T C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A A C G T A C G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:forward strand
Alignment:WSWTMTGCATGAC----
--ATTTGCATAACAATG
 C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-WSWTMTGCATGAC
BTVATTWGCATA--
 A C G T C G A T A T G C C G T A A C G T G T C A C G A T A C T G A G T C C G T A A C G T A C T G C G T A A G T C
A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A A C G T A C G T