Information for 9-TACAGGGCAC (Motif 40)

A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A G T C A G T C A G T C A C G T A C T G A C G T C G T A
p-value:1e-6
log p-value:-1.433e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.2 +/- 17.5bp
Average Position of motif in Background49.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TACAGGGCAC----
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TACAGGGCAC
-NGTGGGCAT
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TACAGGGCAC
WDNCTGGGCA-
 A C G T A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

MTF1/MA0863.1/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TACAGGGCAC
TTTGCACACGGCAC
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TACAGGGCAC
--AAGGTCAC
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TACAGGGCAC---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TACAGGGCAC-----
---RGGGCACTAACY
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TACAGGGCAC---
-ACAAAGGNBCCT
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TACAGGGCAC
-ACAAAG---
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TACAGGGCAC
-TRAGGTCA-
 A C G T C G T A A G T C C G T A C T A G A C T G A C T G A G T C C G T A A G T C
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T